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Species belonging to selected taxon:

Alvinella pompejana



ABOUT THIS RECORD

ID: MNEST007459
species: Alvinella pompejana
miRNA family: mir-467
source: miRNEST

Taxonomy by NCBI:
Alvinella pompejana Alvinella Alvinellidae Terebellida Scolecida Polychaeta Annelida Annelida/Echiura/Pogonophora group Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GGTGTGCATGTGTTTGTGTGT

miRNA*
ACTCACACACACGTGCACACATC

mismatches: 2
bulges: 2

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pre-miRNA
TACATGTGCCCGCACTCACACACACGTGCACACATCCAGTTGATAGCAGACTATTTCTAGTAGGCATTGTAAATACTATGGTGTGCATGTGTTTGTGTGT
TATAAATGTATATTGGTTA


dot-bracket secondary structure
(((((.((...((((..(((.((((((((((((....(((..(((((..((((....))))..))..)))....)))...)))))))))))).)))))))
..)).))))).........



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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